Protein ZmbHLH41
ZmbHLH41 is a protein in the bHLH family.
Information
TF Name: ZmbHLH41
Species: Maize
TF Family: bHLH
Gene Name(Synonym): BHLH41
Uniprot ID: B6UBF8

Protein ZmbHLH41

ZmbHLH41 is a protein in the bHLH family.

Overview of domains present in v5 transcripts
PF00010
Zm00001eb112680_T002
Zm00001eb112680_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d007311DAPseq no logo sequence fimo position
Zm00001d007311DAPseq no logo sequence fimo position
Zm00001d007311ChIPseq no logo sequence fimo position
Zm00001d007311PChIPseq no logo sequence fimo position

Interactions where ZmbHLH41 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmbHLH41 is the target  
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There are 60 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb112680_T002 from maize genome v5

Amino Acid Sequence
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MAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPLSPSSLAAATAVVVGGGGDAV
EAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCFPASCGELSRVPSCQSSLLGE
HAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKSREPETMAKRRKLSTDAARDEAGSHGNGKGKE
VAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEF
LSMKLSTVDPRRELDVGCFVVPKDDVTMQANRLCAPATSSSSSAFCYAARSVVTNAKGFETPLPLANHGVAADDRPLERR
TRDAGPQAGSLWEEDDLQSLVLMGFRGR

MAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPLSPSSLAAATAVVVGGGGDAV
EAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCFPASCGELSRVPSCQSSLLGE
HAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKSREPETMAKRRKLSTDAARDEAGSHGNGKGKE
VAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEF
LSMKLSTVDPRRELDVGCFVVPKDDVTMQANRLCAPATSSSSSAFCYAARSVVTNAKGFETPLPLANHGVAADDRPLERR
TRDAGPQAGSLWEEDDLQSLVLMGFRGR

MAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPLSPSSLAAATAVVVGGGGDAV
EAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCFPASCGELSRVPSCQSSLLGE
HAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKSREPETMAKRRKLSTDAARDEAGSHGNGKGKE
VAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEF
LSMKLSTVDPRRELDVGCFVVPKDDVTMQANRLCAPATSSSSSAFCYAARSVVTNAKGFETPLPLANHGVAADDRPLERR
TRDAGPQAGSLWEEDDLQSLVLMGFRGR

MAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPLSPSSLAAATAVVVGGGGDAV
EAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCFPASCGELSRVPSCQSSLLGE
HAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKSREPETMAKRRKLSTDAARDEAGSHGNGKGKE
VAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEF
LSMKLSTVDPRRELDVGCFVVPKDDVTMQANRLCAPATSSSSSAFCYAARSVVTNAKGFETPLPLANHGVAADDRPLERR
TRDAGPQAGSLWEEDDLQSLVLMGFRGR

MAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPLSPSSLAAATAVVVGGGGDAV
EAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCFPASCGELSRVPSCQSSLLGE
HAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKSREPETMAKRRKLSTDAARDEAGSHGNGKGKE
VAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEF
LSMKLSTVDPRRELDVGCFVVPKDDVTMQANRLCAPATSSSSSAFCYAARSVVTNAKGFETPLPLANHGVAADDRPLERR
TRDAGPQAGSLWEEDDLQSLVLMGFRGR

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00010
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Nucleotide Sequence
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GCTGCCCACCTATTTCACCTCTAGT...

GRMZM2G171818_T01 from maize genome v3


Related TFome: pUT4689

Amino Acid Sequence
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MSSRTHHPCFASVESWEQAAMAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPL
SPSSLAAATAVVVGGGGDAVEAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCF
PASCGELSRVPSCQSSLLGEHAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKSREPETMAKRRK
LSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGK
AVMLDEIINYVQSLQCQVEFLSMKLSTVDPRRELDVGCFVVPKDDVTMQANRLCAPATSSSSSAFCYAARSVVTNAKGFE
TPLPLANHGVAADDRPLERRTRDAGPQAGSLWEEDDLQSLVLMGFRGR

Nucleotide Sequence
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AGTCTCTAGGCTCTGGAGACCTCGC...

GRMZM2G171818_T02 from maize genome v3

Amino Acid Sequence
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MSSRTHHPCFASVESWEQAAMAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPL
SPSSLAAATAVVVGGGGDAVEAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCF
PASCGELSRVPSCQSSLLGEHAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKSREPETMAKRRK
LSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKH
RRPLLKIRLKTHAYFNFQRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDLHSALSALLRT

Nucleotide Sequence
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AGTCTCTAGGCTCTGGAGACCTCGC...

GRMZM2G171818_T03 from maize genome v3

Amino Acid Sequence
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MSSRTHHPCFASVESWEQAAMAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPL
SPSSLAAATAVVVGGGGDAVEAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCF
PASCGELSRVPSCQSSLLGEHAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKVLTISVSPFLKL
CQTSL

Nucleotide Sequence
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AGTCTCTAGGCTCTGGAGACCTCGC...

Zm00001d007311_T001 from maize genome v4

Amino Acid Sequence
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MSSRTHHPCFASVESWEQAAMAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPL
SPSSLAAATAVVVGGGGDAVEAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCF
PASCGELSRVPSCQSSLLGEHAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKPLMNGCRNSETV
KSREPETMAKRRKLSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLL
QDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLSMKLSTVDPRRELDVGCFVVPKDDVTMQANRLCAPATSSSSSAFCY
AARSVVTNAKGFETPLPLANHGVAADDRPLERRTRDAGPQAGSLWEEDDLQSLVLMGFRGR

Nucleotide Sequence
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AGTCTCTAGGCTCTGGAGACCTCGC...

Zm00001d007311_T002 from maize genome v4

Amino Acid Sequence
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MEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCFPASCGELSRVPSCQSSLLGEHAPT
PAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKSREPETMAKRRKLSTDAARDEAGSHGNGKGKEVAPA
AEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKTPRPREGYREGRDAGRDHKLRTVAAVPG
GVPVDEAVDGRPAPGARRGLLRRPQRRRNDAGQQAVRARDVVVELSLLLRRAECCYERQRIRDAAALGEPWRRGGRQAT

Nucleotide Sequence
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GGGGTGGGAACACGACGCCGCGACG...

Zm00001d007311_T003 from maize genome v4

Amino Acid Sequence
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MSSRTHHPCFASVESWEQAAMAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPL
SPSSLAAATAVVVGGGGDAVEAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCF
PASCGELSRVPSCQSSLLGEHAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKSREPETMAKRRK
LSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGK
AVMLDEIINYVQSLQCQVEFLSMKLSTVDPRRELDVGCFVVPKDDVTMQANRLCAPATSSSSSAFCYAARSVVTNAKGFE
TPLPLANHGVAADDRPLERRTRDAGPQAGSLWEEDDLQSLVLMGFRGR

Nucleotide Sequence
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GCGCACCATCCCACCAGCAGCAAGC...

Zm00001eb112680_T001 from maize genome v5

Amino Acid Sequence
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MAHDGFLGDLACPLPLAHAATAAPFDPLRVHVAHALTGAGAGWEHDAATGALVPSRPRPLSPSSLAAATAVVVGGGGDAV
EAALMEQLASRLGVSVPSPPPSRYASCHGTPAGSPSKSAAPWVLAGDAAPAERATGLPCFPASCGELSRVPSCQSSLLGE
HAPTPAPAPLPGAAKQHASDGSCSDGPCRKRKASGGKAKDVVTTATPKSREPETMAKRRKLSTDAARDEAGSHGNGKGKE
VAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKTPRPREGYREGRDAGRDHKLRTVA
AVPGGVPVDEAVDGRPAPGARRGLLRRPQRRRNDAGQQAVRARDVVVELSLLLRRAECCYERQRIRDAAALGEPWRRGGR
QAT

Nucleotide Sequence
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CATCGATCACGGGCAGAAACGGCTC...


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